covid-19 ontology
Systematic Analysis of COVID-19 Ontologies
Bain, Debanjali, Dutta, Biswanath
This comprehensive study conducts an in-depth analysis of existing COVID-19 ontologies, scrutinizing their objectives, classifications, design methodologies, and domain focal points. The study is conducted through a dual-stage approach, commencing with a systematic review of relevant literature and followed by an ontological assessment utilizing a parametric methodology. Through this meticulous process, twenty-four COVID-19 Ontologies (CovOs) are selected and examined. The findings highlight the scope, intended purpose, granularity of ontology, modularity, formalism, vocabulary reuse, and extent of domain coverage. The analysis reveals varying levels of formality in ontology development, a prevalent preference for utilizing OWL as the representational language, and diverse approaches to constructing class hierarchies within the models. Noteworthy is the recurrent reuse of ontologies like OBO models (CIDO, GO, etc.) alongside CODO. The METHONTOLOGY approach emerges as a favored design methodology, often coupled with application-based or data-centric evaluation methods. Our study provides valuable insights for the scientific community and COVID-19 ontology developers, supplemented by comprehensive ontology metrics. By meticulously evaluating and documenting COVID-19 information-driven ontological models, this research offers a comparative cross-domain perspective, shedding light on knowledge representation variations. The present study significantly enhances understanding of CovOs, serving as a consolidated resource for comparative analysis and future development, while also pinpointing research gaps and domain emphases, thereby guiding the trajectory of future ontological advancements.
Development of the InBan_CIDO Ontology by Reusing the Concepts along with Detecting Overlapping Information
Patel, Archana, Debnath, Narayan C
The covid19 pandemic is a global emergency that badly impacted the economies of various countries. Covid19 hit India when the growth rate of the country was at the lowest in the last 10 years. To semantically analyze the impact of this pandemic on the economy, it is curial to have an ontology. CIDO ontology is a well standardized ontology that is specially designed to assess the impact of coronavirus disease and utilize its results for future decision forecasting for the government, industry experts, and professionals in the field of various domains like research, medical advancement, technical innovative adoptions, and so on. However, this ontology does not analyze the impact of the Covid19 pandemic on the Indian banking sector. On the other side, Covid19IBO ontology has been developed to analyze the impact of the Covid19 pandemic on the Indian banking sector but this ontology does not reflect complete information of Covid19 data. Resultantly, users cannot get all the relevant information about Covid19 and its impact on the Indian economy. This article aims to extend the CIDO ontology to show the impact of Covid19 on the Indian economy sector by reusing the concepts from other data sources. We also provide a simplified schema matching approach that detects the overlapping information among the ontologies. The experimental analysis proves that the proposed approach has reasonable results.
Bias in ontologies -- a preliminary assessment
Logical theories in the form of ontologies and similar artefacts in computing and IT are used for structuring, annotating, and querying data, among others, and therewith influence data analytics regarding what is fed into the algorithms. Algorithmic bias is a well-known notion, but what does bias mean in the context of ontologies that provide a structuring mechanism for an algorithm's input? What are the sources of bias there and how would they manifest themselves in ontologies? We examine and enumerate types of bias relevant for ontologies, and whether they are explicit or implicit. These eight types are illustrated with examples from extant production-level ontologies and samples from the literature. We then assessed three concurrently developed COVID-19 ontologies on bias and detected different subsets of types of bias in each one, to a greater or lesser extent. This first characterisation aims contribute to a sensitisation of ethical aspects of ontologies primarily regarding representation of information and knowledge.
Detecting fake news for the new coronavirus by reasoning on the Covid-19 ontology
In the context of the Covid-19 pandemic, many were quick to spread deceptive information. I investigate here how reasoning in Description Logics (DLs) can detect inconsistencies between trusted medical sources and not trusted ones. The not-trusted information comes in natural language (e.g. "Covid-19 affects only the elderly"). To automatically convert into DLs, I used the FRED converter. Reasoning in Description Logics is then performed with the Racer tool.